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Table 2 Results GWAS

From: A genome-wide association study in Swedish colorectal cancer patients with gastric- and prostate cancer in relatives

Locus

HS

BP 1

BP2

HF

OR

P Value

Genes

1q32.2

9

208,968,409

209,083,609

0.03

2.08

3.17E-08

No gene

3q29

17

195,750,742

195,973,244

0.02

2.99

2.32E-08

TFRC, SLC51A, ZDHHC19, PCYT1A

4q35.1

21

185,088,648

185,252,818

0.01

2.84

1.30E-08

ENPP6

4q26

20

119,506,139

119,835,148

0.01

3.62

1.59E-08

METTL14, SEC24D, SYNPO2

4p15.31

24

20,852,244

21,112,046

0.01

3.25

2.72E-08

KCNIP4

8p23.1

14

11,236,975

11,355,821

0.01

3.04

4.47E-08

FAM167A, BLK

13q33.3

13

109,832,287

109,897,922

0.11

1.71

9.20E-09

MYO16

13q13.3

9

37,374,156

37,460,648

0.07

1.86

4.15R-08

RFXAP, SMAD9

16q23.3

8

82,871,769

82,899,877

0.01

3.60

1.38E-08

CDH13

22q11.21

12

19,872,009

19,930,121

0.03

2.30

2.56E-10

TXNRD2, COMT

  1. HS Haplotype window sizes, BP Base pair (GRCh37), HF Haplotype frequency in samples, OR Odds ratio